Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGCTCCCCCTCCCTAAGCTCCAGGGTCC
.(((((((.(((...((((((&))))))................))).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_198679
GeneSymbolRAPGEF1
Binding site3814,3848
Score0.846
Seed1
Au0.456
Energy-25.2
Binding len34
Me-7.731
Phylopstem0.6141075428571429
Phylopflank1.2972012199999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure