Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTAAGGCAGCAGCTGCAGC
((((((((((.(((...((((&)))).....))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198679
GeneSymbolRAPGEF1
Binding site4570,4594
Score0.923
Seed1
Au0.324
Energy-23.2
Binding len24
Me-7.731
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure