Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTGCTGGAGGGGAGCCT
....(((((((((((((((((.&))))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198681
GeneSymbolPLEKHG5
Binding site2564,2584
Score0.923
Seed0
Au0.338
Energy-25.0
Binding len20
Me-9.547
Phylopstem-0.3836296405263158
Phylopflank0.2905554985
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure