Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGGTGAAACTAAAAACAACAGGATTAGAGGAGGCGGCTGA
(((((.(((((((((((((((.&))))))))).........................)))))).))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350743
GeneSymbolSRPK2
Binding site1168,1216
Score0.923
Seed0
Au0.515
Energy-27.5
Binding len48
Me-5.839
Phylopstem3.4307686399999993
Phylopflank3.830770175
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end7
PositionCDS
2D Structure