Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTCTTGCGGGGGGAGGGGGGCGCTTCTAGAAAGTTCCCATGGCAGTGG
(((((((((((((((((((...&))))..........)))))))))).....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198687
GeneSymbolKRTAP10-4
Binding site1447,1498
Score0.897
Seed1
Au0.382
Energy-21.9
Binding len51
Me-3.938
Phylopstem-0.29264136399999996
Phylopflank-0.46248168750000024
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure