Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTCCTGCCAACCCAGCTGCT
..(((((((.(((((..(((.&.)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198687
GeneSymbolKRTAP10-4
Binding site1179,1204
Score0.923
Seed1
Au0.294
Energy-25.0
Binding len19
Me-6.433
Phylopstem0.9134217142857143
Phylopflank0.05481156499999995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure