Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGATCCGCGGAATGCAGA
(((((.((((((.....(((.&)))....))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350743
GeneSymbolSRPK2
Binding site1756,1777
Score0.942
Seed0
Au0.559
Energy-19.0
Binding len21
Me-8.953
Phylopstem4.932542166666667
Phylopflank6.298816700875
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure