Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCACCTGCCAGCCCAGCTGCT
..(((((((.(((((..((((&.))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198696
GeneSymbolKRTAP10-3
Binding site620,645
Score0.846
Seed1
Au0.25
Energy-26.3
Binding len20
Me-6.433
Phylopstem-0.03206809999999998
Phylopflank-0.25814121749999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure