Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGCTATCAAGATGTTTGTGGGCCAGGTT
(((((((.(((((.........&.))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198700
GeneSymbolCELF1
Binding site240,270
Score0.923
Seed1
Au0.5
Energy-17.2
Binding len15
Me-8.077
Phylopstem-0.5770314857142858
Phylopflank-0.006807569999999957
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure