Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGCAGCC
..((.(((((((((((.(.((&.)).).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198705
GeneSymbolHSD11B1L
Binding site829,874
Score0.846
Seed0
Au0.294
Energy-23.3
Binding len21
Me-9.076
Phylopstem-0.08758279
Phylopflank-0.3423292644999999
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure