Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGTTTGTAACAAATGAATGTAAGTACTATTTACATGGTGTGCCTAGGA
.((((((((((.((((((((..&.)))))))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198715
GeneSymbolPTGER3
Binding site6356,6408
Score0.846
Seed1
Au0.618
Energy-22.6
Binding len22
Me-7.14
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure