Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCGGAAAGGTGGGAGATTACCAGCAAGCCAGG
..(((((((((((((((((...&)))))))))))................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198718
GeneSymbolPTGER3
Binding site1605,1639
Score1.0
Seed1
Au0.544
Energy-23.7
Binding len34
Me-4.957
Phylopstem0.07452401212121207
Phylopflank0.16312741250000007
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure