Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTACATTCTGTGCA
.....(((((.(((((((((((&))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198721
GeneSymbolCOL25A1
Binding site6021,6039
Score0.923
Seed0
Au0.618
Energy-15.6
Binding len18
Me-16.49
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure