Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCGCGCTGCGCTGTAGC
(((((((.(((((((.((((.&)))).)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198721
GeneSymbolCOL25A1
Binding site93,114
Score0.872
Seed1
Au0.441
Energy-19.4
Binding len21
Me-6.484
Phylopstem0.300441625
Phylopflank0.2182202761875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure