Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAGGTGTGCTAGT
..(((((((((..(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198722
GeneSymbolAMIGO3
Binding site1965,1982
Score1.0
Seed1
Au0.368
Energy-20.0
Binding len17
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure