Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGGCCTGCAGCTGA
...(((((((((((...(((.&)))...)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198722
GeneSymbolAMIGO3
Binding site1659,1678
Score0.923
Seed0
Au0.426
Energy-21.9
Binding len19
Me-7.483
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure