Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAATTGCAGCA
.....((((((((((.(((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198798
GeneSymbolANKEF1
Binding site3429,3445
Score0.923
Seed0
Au0.632
Energy-19.1
Binding len16
Me-13.899
Phylopstem2.1348179
Phylopflank1.5410821762500002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure