Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAATGGGCTGTACTCCCACAATGAGGGCTGCAGA
((((((((...(((((..((.&.)).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198798
GeneSymbolANKEF1
Binding site623,660
Score0.846
Seed1
Au0.515
Energy-18.2
Binding len21
Me-9.061
Phylopstem1.8500037500000004
Phylopflank2.0457441249999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure