Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCATGAGCCGCAGCCACAGG
(((..(((((((((....(((&))).....)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198836
GeneSymbolACACA
Binding site7619,7642
Score0.846
Seed0
Au0.324
Energy-20.3
Binding len23
Me-12.057
Phylopstem5.163210111111111
Phylopflank5.7336150862499995
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure