Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTGTGGCCGGGA
.(((((((((((((........&)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198837
GeneSymbolACACA
Binding site3401,3416
Score0.923
Seed1
Au0.515
Energy-18.0
Binding len15
Me-4.762
Phylopstem5.3652863928571435
Phylopflank5.228870368750001
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end0
PositionCDS
2D Structure