Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCCGGCTGCC
..(((((((.(((((..((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198838
GeneSymbolACACA
Binding site9073,9090
Score1.0
Seed1
Au0.338
Energy-23.3
Binding len17
Me-6.433
Phylopstem4.129922285714286
Phylopflank5.679346243749999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure