Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAAAAGTTGGGGCTGCAAT
((((((((.(((((((((...&))))))...))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198847
GeneSymbolFAM111A
Binding site2668,2690
Score0.846
Seed1
Au0.618
Energy-18.9
Binding len22
Me-4.994
Phylopstem-0.22066779166666664
Phylopflank0.08263887499999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure