Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCTCCACAGTGGGTGGAAGAGTGCAAGGTCTGCCAGGTC
((((((((.((..((((.....&.))))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198868
GeneSymbolTBC1D9B
Binding site4648,4690
Score0.846
Seed1
Au0.412
Energy-19.2
Binding len19
Me-9.63
Phylopstem-0.24410326750000003
Phylopflank0.63242088375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure