Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGATGTCTGATTTTGGAGCTGCAGCATGCC
..((((((((((((.((((((&.)))))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350769
GeneSymbolC1orf109
Binding site1298,1332
Score0.923
Seed1
Au0.456
Energy-23.1
Binding len22
Me-5.692
Phylopstem-0.14725470153846154
Phylopflank-0.2711920164999999
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure