Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCATGCGGCAGCTGCT
..((((((((.((.((.((((&)))).))...)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198868
GeneSymbolTBC1D9B
Binding site812,834
Score0.846
Seed1
Au0.353
Energy-24.3
Binding len22
Me-8.639
Phylopstem-0.16723725
Phylopflank-0.39501085500000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure