Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCTGGGCTGCAGC
((((((((((((((((.....&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198868
GeneSymbolTBC1D9B
Binding site2211,2230
Score0.962
Seed1
Au0.324
Energy-23.2
Binding len19
Me-3.938
Phylopstem0.08962404444444445
Phylopflank0.48147120750000005
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure