Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCCCCAGCTGCAGG
(((((((((.(((((.(((.(&).))))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198868
GeneSymbolTBC1D9B
Binding site3368,3390
Score0.846
Seed1
Au0.338
Energy-22.8
Binding len22
Me-5.413
Phylopstem-0.08916162222222224
Phylopflank-0.36257809374999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure