Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCTTTGTGTTGGGACGCTTTAATGTCAGGG
.((((((((((((.((((((((&)))))))).))))..............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198887
GeneSymbolNUP43
Binding site3756,3792
Score0.846
Seed1
Au0.662
Energy-21.1
Binding len36
Me-4.65
Phylopstem0.17831254230769228
Phylopflank0.45427179124999995
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure