Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGACCGGCTGCAGA
(((((((..(((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198890
GeneSymbolATG16L1
Binding site222,240
Score0.923
Seed1
Au0.368
Energy-19.7
Binding len18
Me-8.276
Phylopstem0.038046142857142855
Phylopflank0.07706778249999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure