Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCTCTTCCTGAACCGATGACTGCTAGTGAAGCAGCTGCT
..(((((((((((((.((((.&)))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198892
GeneSymbolBMP2K
Binding site1193,1238
Score0.846
Seed1
Au0.544
Energy-22.0
Binding len45
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure