Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCGGCGGCAGCTGTGGA
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198896
GeneSymbolRAB6A
Binding site17,40
Score0.846
Seed1
Au0.279
Energy-23.0
Binding len18
Me-6.762
Phylopstem0.30545697000000005
Phylopflank0.17548975428571428
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure