Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATATTGTATGGCCT
....((((((((((((((....&)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198902
GeneSymbolTSPAN3
Binding site3558,3574
Score0.846
Seed0
Au0.632
Energy-17.7
Binding len16
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure