Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACTGGCATTTGCAGCTATTCAGCTGCT
..(((((((.(((((((((((&.)).)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198902
GeneSymbolTSPAN3
Binding site722,754
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len24
Me-6.2
Phylopstem0.06893107583333336
Phylopflank0.25436989525
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure