Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCCCGTGGCTGCAC
.(((((((((((..((.(((.&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198902
GeneSymbolTSPAN3
Binding site3437,3454
Score0.923
Seed1
Au0.412
Energy-22.1
Binding len17
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure