Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAGCAGCTGCC
..((((((((..(((..((((&))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198924
GeneSymbolTRIM73
Binding site1040,1058
Score0.846
Seed1
Au0.426
Energy-21.0
Binding len18
Me-11.362
Phylopstem4.55014625
Phylopflank4.9372076925
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure