Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCACAGGGGCCC
....(((((((.(((((((((.&)))))))).).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198925
GeneSymbolSEMA4B
Binding site3678,3697
Score0.821
Seed0
Au0.588
Energy-26.6
Binding len19
Me-12.893
Phylopstem1.0721168999999997
Phylopflank0.46244785750000017
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure