Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTGAAACTCTTAAAAGAGAAAAGTTAAAAGTTGCAAA
((((((((..(((((((((((&)))))))...))))....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198929
GeneSymbolPYHIN1
Binding site474,517
Score0.846
Seed1
Au0.706
Energy-16.1
Binding len43
Me-6.236
Phylopstem-0.9057099571428571
Phylopflank-0.19571039749999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure