Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGGGAGCCC
....((((((...(((((((((&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198935
GeneSymbolSS18L1
Binding site1090,1106
Score0.846
Seed0
Au0.279
Energy-26.3
Binding len16
Me-17.007
Phylopstem-1.8704725555555557
Phylopflank-1.0246034025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure