Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGGCTCTCCCTGTCCAGCCGCCTGCAGCTGA
((((((..(((((((..(((.&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198938
GeneSymbolPTGES2
Binding site186,221
Score0.846
Seed0
Au0.353
Energy-21.9
Binding len21
Me-8.028
Phylopstem3.924326428571429
Phylopflank5.5571969125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure