Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCTGGCTGCT
..(((((((((((....((((&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198946
GeneSymbolLCN6
Binding site49,66
Score1.0
Seed1
Au0.353
Energy-20.0
Binding len17
Me-6.782
Phylopstem-0.16627945
Phylopflank-0.16996214000000004
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure