Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGAAACGCAAGGAGCAGG
..((.((((((((((((((...&))))))))......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198965
GeneSymbolPTHLH
Binding site955,978
Score0.846
Seed0
Au0.485
Energy-21.4
Binding len23
Me-9.076
Phylopstem-0.17967674499999997
Phylopflank-0.41465314375
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure