Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGTTAGACTCTGGAGTGACTGGGAGTGGGCTAGA
..((((((((((((((((((((&)))))))))...................)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198965
GeneSymbolPTHLH
Binding site1001,1042
Score0.846
Seed1
Au0.426
Energy-21.2
Binding len41
Me-4.957
Phylopstem0.6181498799999998
Phylopflank0.21787048249999993
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure