Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGCATTATTCTAGAAACAGTGCCAGGG
.((((((((....(.((((...&.)))).)....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198971
GeneSymbolHINFP
Binding site1339,1372
Score0.846
Seed1
Au0.456
Energy-18.3
Binding len20
Me-13.232
Phylopstem-0.017535374999999992
Phylopflank-0.08514168624999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure