Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAGAGGAGCTGAATAGTTAGGCTTGTTCCCCTTCTGGTGA
(((((((((((((((((((...&))))))).)))))))).........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198971
GeneSymbolHINFP
Binding site2235,2281
Score0.974
Seed1
Au0.574
Energy-25.6
Binding len46
Me-3.938
Phylopstem-0.24665811333333332
Phylopflank-0.08168952874999996
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end5
Position3UTR
2D Structure