Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATATGCGGCTGCAGCTGG
...((((((((((((((.(((&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198971
GeneSymbolHINFP
Binding site1229,1250
Score1.0
Seed0
Au0.485
Energy-24.3
Binding len21
Me-6.515
Phylopstem-1.0772383499999998
Phylopflank-0.32645865500000004
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure