Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCAGGGTGTGCCAGA
..(((((((((..(((((((((&)))))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198973
GeneSymbolMKNK1
Binding site996,1017
Score0.808
Seed1
Au0.382
Energy-27.3
Binding len21
Me-9.593
Phylopstem4.568272677777778
Phylopflank3.680873673749999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure