Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGACGGGCCCTGGCCCAGGCAGGCCGTGGTGA
(((((((((.(((((((((...&))))))))).)))))..................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198973
GeneSymbolMKNK1
Binding site1341,1379
Score0.846
Seed1
Au0.279
Energy-23.6
Binding len38
Me-5.18
Phylopstem3.0564823333333333
Phylopflank1.4997428375
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure