Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATATACGAGCTGGTGG
(((((((((...(((((((...&))))))).....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198977
GeneSymbolARHGEF1
Binding site2228,2250
Score0.846
Seed1
Au0.426
Energy-25.6
Binding len22
Me-11.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure