Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACGACCTGCTGCTGCT
..(((((.((((((((..(((&)))..)))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198977
GeneSymbolARHGEF1
Binding site2035,2056
Score0.846
Seed0
Au0.309
Energy-23.7
Binding len21
Me-7.271
Phylopstem-0.2224050333333333
Phylopflank-0.7970591024999999
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure