Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTCTGTCAGCTGCAGA
((((((((((((((((.....&))))))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198995
GeneSymbolCCDC178
Binding site2500,2520
Score0.962
Seed1
Au0.515
Energy-20.1
Binding len20
Me-3.938
Phylopstem3.603966308947369
Phylopflank3.6260574358749995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure